Augusto Elias Valderrama Aguirre

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Augusto Elias Valderrama Aguirre

Augusto Elias Valderrama Aguirre

Doctor en Ciencias Biomédicas

a.valderramaa @uniandes.edu.co

Profesor Asistente

Departamento de Ciencias Biológicas

Profile
Courses
Products
Degrees
Projects

Profile

Recent Courses

  • 2024
    • FUNDAMENTOS DE VIROLOGIA

      Second period
      Bachelor Level

      TG,MONOGR,PASANTIA,EMPRENDIM

      First period
      Bachelor Level

Recent Products

Kaiser B, Uberoi D, Raven-Adams M, Cheung K, Bruns A, Chandrasekharan S, Otlowski M, Prince AER, Tiller J, Ahmed A, Bombard Y, Dupras C, Granados P, Ryan R, Valderrama A, Joly Y. (2024)
A proposal for an inclusive working definition of genetic discrimination to promote a more coherent debate
Nature Genetics (ISSN 1061-4036)
Article
.(2024). Caracterización de la respuesta inmune mediada por anticuerpos y su capacidad neutralizante contra bacteriófagos en individuos no expuestos a fagoterapia: Estudio piloto.
Caracterización de la respuesta inmune mediada por anticuerpos y su capacidad neutralizante contra bacteriófagos en individuos no expuestos a fagoterapia: Estudio piloto
Thesis

Recent Degrees

Doctor en Ciencias Biomédicas

Doctoral degree

Universidad Del Valle

2016

Colombia

Magister en Ciencias Básicas Médicas

Master degree

Universidad Del Valle

2005

Colombia

Recent Projects

  • 2022
    • Strengthening Personalized Medicine and Precision Public Health in the Context of Cardiometabolic Diseases (CMDs) in Colombia: A Translational and Convergent Approach.

      Duration: 36 months

      PR.3.2022.9247

      This is a translational, biomedical research project,1,17,2 planned to contribute to move promising basic sciences knowledge towards a specific utility in CMDs, either individually (personalized medicine) or at a community level (precision public health).18,19 None of the experimental approaches described here involve clinical trials, but will certainly use human samples. Most of the projects within every WP belong to the category of pilot, cross-sectional studies, except the characterization of the UKBB Latino and Colombian which is a retrospective study.The project is focused in CMDs, the highest morbimortality and healthcare cost burden in the whole world.7,8,11,12 Unfortunately, some of the scientific advances made in developed countries need specific approaches to solve questions tan can only be solved under the specific conditions of the countries where they are intended to be applied. Such is the case of human genomics and its use as a prognosis and/or predictive tool, appliable to both individual and community levels, with the main goal of doing preventive medicine in chronic complex diseases.20,17,21,22 While most of the knowledge has been gained in developed countries with predominantly European ancestry population cohorts,21,22 very few have been carried out in more diverse and admixed populations as the ones in Colombia. Colombian populations are highly admixed as a result of the Columbian Exchange.23,24,25,26 A similar case occurs with the some viral-based therapies considered as promising tools in the context of CMDs.27,28 Given they are based of viruses that circulate in the population like AAVs and bacteriophages, the background immunity induced naturally might hamper their therapeutical effectiveness.29–32 Such background immunity has proven to be have shown strong regional and population variations and, therefore, they need to be assessed as part of their characterization as therapy tools in every population where they are considered for use.33,34 The project has been organized in two WPs. Methodologically, WP1 includes two genomics studies to be performed mostly in an in-silico research environment. It involves DNA isolation, genotyping, and bioinformatics. Given the scope of genomics, WP1 is focused on a wider spectrum of CMDs and is planned to be executed during the three years of funding. WP2 includes two seroepidemiological studies. This WP is to be performed in an in vitro scenario and planned to be executed since the second year of the project. Finally, both WPs involve local, national, and international collaborations, as well as opportunities for graduate and undergraduate students from the DCB and other academic areas at Uniandes (Figure S3). It is expected that this proposal allows a minimum of 5 scientific publications, including at least three manuscripts from WP1 and two from WP2.

Courses

  • 2024
    • FUNDAMENTOS DE VIROLOGIA

      Second period
      Bachelor Level

      TG,MONOGR,PASANTIA,EMPRENDIM

      First period
      Bachelor Level
    • TEORIA TUMORAL

      First period
      Master Level

      FUND.BIOL.CELULAR Y MOLECULAR

      First period
      Bachelor Level
    • FUNDAMENTOS DE INMUNOLOGIA

      First period
      Bachelor Level

      SEMINARIOS INVESTIGACIÓN L.D.

      Second period
      Master Level
    • VIROLOGIA APLICADA

      Second period
      Bachelor Level

      TG,MONOGR,PASANTIA,EMPRENDIM

      Second period
      Bachelor Level
    • INMUNOLOGIA APLICADA

      First period
      Bachelor Level
  • 2023
    • FUNDAMENTOS DE VIROLOGIA

      Second period
      Bachelor Level

      VIROLOGIA APLICADA

      Second period
      Bachelor Level
    • FUND.BIOL.CELULAR Y MOLECULAR

      Second period
      Bachelor Level

      TG,MONOGR,PASANTIA,EMPRENDIM

      Second period
      Bachelor Level
    • RIGUROSIDAD CIENTÍFICA

      First period
      Bachelor Level

      FUND.BIOL.CELULAR Y MOLECULAR

      First period
      Bachelor Level
    • FUNDAMENTOS DE INMUNOLOGIA

      First period
      Bachelor Level

      INMUNOLOGIA APLICADA

      First period
      Bachelor Level
    • METODOS EN INMUNOLOGÍA

      Second period
      Master Level
  • 2022
    • BIOLOGÍA MOLECULAR-TEO

      First period
      Bachelor Level

      FUNDAMENTOS DE VIROLOGIA

      First period
      Bachelor Level
    • FUNDAMENTOS DE INMUNOLOGIA

      First period
      Bachelor Level

      RIGUROSIDAD CIENTÍFICA

      Second period
      Bachelor Level
    • FUND.BIOL.CELULAR Y MOLECULAR

      Second period
      Bachelor Level

      INMUNOLOGIA APLICADA

      Second period
      Bachelor Level
    • VIROLOGIA APLICADA

      Second period
      Bachelor Level

      TRABAJO GRADO, MONOGR, PRAC.GR

      Second period
      Bachelor Level
  • 2021
    • BIOLOGÍA MOLECULAR AVANZADA

      First period
      Master Level

      VIROLOGÍA-TEO

      First period
      Bachelor Level
    • VIROLOGÍA-TEO

      Second period
      Bachelor Level

      INMUNOLOGÍA-TEO

      Second period
      Bachelor Level

Products

Kaiser B, Uberoi D, Raven-Adams M, Cheung K, Bruns A, Chandrasekharan S, Otlowski M, Prince AER, Tiller J, Ahmed A, Bombard Y, Dupras C, Granados P, Ryan R, Valderrama A, Joly Y. (2024)
A proposal for an inclusive working definition of genetic discrimination to promote a more coherent debate
Nature Genetics (ISSN 1061-4036)
Article
.(2024). Caracterización de la respuesta inmune mediada por anticuerpos y su capacidad neutralizante contra bacteriófagos en individuos no expuestos a fagoterapia: Estudio piloto.
Caracterización de la respuesta inmune mediada por anticuerpos y su capacidad neutralizante contra bacteriófagos en individuos no expuestos a fagoterapia: Estudio piloto
Thesis
.(2024). Frecuencia de la mutación CCR5-Δ32 en poblaciones de Colombia y comparación con poblaciones globales.
Frecuencia de la mutación CCR5-Δ32 en poblaciones de Colombia y comparación con poblaciones globales
Thesis
.(2024). Frecuencia, distribución y ancestría de SNPs asociados al inmunosupresor Tacrolimus en Colombia.
Frecuencia, distribución y ancestría de SNPs asociados al inmunosupresor Tacrolimus en Colombia
Thesis
.(2024). Prediction of cross-reactivity between human IgA and manatee (Trichechus manatus) IgA: A computational biology study.
Prediction of cross-reactivity between human IgA and manatee (Trichechus manatus) IgA: A computational biology study
Thesis
Valderrama A, Caballero S. (2024)
Unlocking epitope similarity: a comparative analysis of the American manatee (Trichechus manatus) IgA and human IgA through an immuno-informatics approach
Article
Valderrama A. (2023)
CÓDIGO-Colombia: diversidad genómica, ancestría y salud en Colombia
Revista Hipotesis (ISSN 1672-729X)
Journalistic Production
Jordan IK, Sharma S, Nagar S, Valderrama A, Mariño-Ramirez L. (2022)
Correction to: Genetic Ancestry Inference for Pharmacogenomics
Article
Jordan IK, Sharma S, Nagar S, Valderrama A, Mariño-Ramirez L. (2022)
Genetic Ancestry Inference for Pharmacogenomics.
Methods in Molecular Biology (ISBN 978-1-0716-2573-6)
Inbook
Manrique M, Valderrama A. (2022)
Investigación Traslacional
Ginecología y obstetricia basadas en nuevas evidencias. (ISBN 978-958-5577-69-5)
Inbook
.(2022). Potencial inmunomodulador de la planta Morinda citrifolia (noni): revisión de alcance.
Potencial inmunomodulador de la planta Morinda citrifolia (noni): revisión de alcance
Thesis
Medina-Cordoba L, Chande A, Lavanya R, Mayer L, Valderrama-Aguirre L, Valderrama A, Gaby J, Kostka J, Jordan IK. (2021)
Genomic characterization and computational phenotyping of nitrogen-fixing bacteria isolated from Colombian sugarcane fields
SCIENTIFIC REPORTS (ISSN 2045-2322)
Article
Chavez M, Villamarin H, Tascon A, Valderrama A. (2021)
Plasma interleukin-6 levels correlate with survival in patients with bacterial sepsis and septic shock
Interventional Medicine and Applied Science (ISSN 2061-1617)
Article
Norris E, Lavanya R, Chande A, A.B. Conley, Yeee K, Valderrama A, Jordan IK. (2020)
Admixture-enabled selection for rapid adaptive evolution in the Americas
Genome Biology (ISSN 1474-760X)
Article
Nagar S, Moreno M, Norris E, Lavanya R, A.B. Conley, O'Neal K, Velez-Gomez S, Montes-Rodriguez C, Jaraba-Alvarez W, Torres I, Medina-Rivas M, Valderrama A, Jordan IK, Gallo J. (2019)
Population pharmacogenomics for precision public health in Colombia
Frontiers in Genetics (ISSN 1664-8021)
Article

Degrees

  • Doctor en Ciencias Biomédicas

    Doctoral degree

    Universidad Del Valle

    2016

    Colombia

    Magister en Ciencias Básicas Médicas

    Master degree

    Universidad Del Valle

    2005

    Colombia

  • Bacteriólogo y Laboratorista Clínico

    Bachelor degree

    Universidad Del Valle

    1998

    Colombia

Projects

  • 2022
    • Strengthening Personalized Medicine and Precision Public Health in the Context of Cardiometabolic Diseases (CMDs) in Colombia: A Translational and Convergent Approach.

      Duration: 36 months

      PR.3.2022.9247

      This is a translational, biomedical research project,1,17,2 planned to contribute to move promising basic sciences knowledge towards a specific utility in CMDs, either individually (personalized medicine) or at a community level (precision public health).18,19 None of the experimental approaches described here involve clinical trials, but will certainly use human samples. Most of the projects within every WP belong to the category of pilot, cross-sectional studies, except the characterization of the UKBB Latino and Colombian which is a retrospective study.The project is focused in CMDs, the highest morbimortality and healthcare cost burden in the whole world.7,8,11,12 Unfortunately, some of the scientific advances made in developed countries need specific approaches to solve questions tan can only be solved under the specific conditions of the countries where they are intended to be applied. Such is the case of human genomics and its use as a prognosis and/or predictive tool, appliable to both individual and community levels, with the main goal of doing preventive medicine in chronic complex diseases.20,17,21,22 While most of the knowledge has been gained in developed countries with predominantly European ancestry population cohorts,21,22 very few have been carried out in more diverse and admixed populations as the ones in Colombia. Colombian populations are highly admixed as a result of the Columbian Exchange.23,24,25,26 A similar case occurs with the some viral-based therapies considered as promising tools in the context of CMDs.27,28 Given they are based of viruses that circulate in the population like AAVs and bacteriophages, the background immunity induced naturally might hamper their therapeutical effectiveness.29–32 Such background immunity has proven to be have shown strong regional and population variations and, therefore, they need to be assessed as part of their characterization as therapy tools in every population where they are considered for use.33,34 The project has been organized in two WPs. Methodologically, WP1 includes two genomics studies to be performed mostly in an in-silico research environment. It involves DNA isolation, genotyping, and bioinformatics. Given the scope of genomics, WP1 is focused on a wider spectrum of CMDs and is planned to be executed during the three years of funding. WP2 includes two seroepidemiological studies. This WP is to be performed in an in vitro scenario and planned to be executed since the second year of the project. Finally, both WPs involve local, national, and international collaborations, as well as opportunities for graduate and undergraduate students from the DCB and other academic areas at Uniandes (Figure S3). It is expected that this proposal allows a minimum of 5 scientific publications, including at least three manuscripts from WP1 and two from WP2.